腸桿菌科

肠杆菌科
佛氏檸檬酸桿菌 Citrobacter freundii
科学分类 编辑
域： 细菌域 Bacteria
门： 假單胞菌門 Pseudomonadota
纲： γ-變形菌綱 Gammaproteobacteria
目： 肠杆菌目 Enterobacterales
科： 肠杆菌科 Enterobacteriaceae
Rahn, 1937
多样性[1]
至少63个属

腸桿菌科（学名：Enterobacteriaceae）是γ-变形菌纲肠杆菌目的一科，为格蘭氏陰性菌中的一個類群，皆為桿菌。它們普遍存在於動物體腸道、水、土壤、寄生蟲等。其中，大腸桿菌是被研究最多的一种。[1]

分类

至少有63个已确认的属，如下（括号内为发表年份）[1]：

  • 交替球菌属 Alterococcus (1999)
  • 杀雄菌属 Arsenophonus (1991)
  • Brenneria (1999)
  • 巴克纳氏菌属 Buchnera (1991)
  • 布戴约维采菌属 Budvicia (1985)
  • 布丘氏菌属 Buttiauxella (1982)
  • 西地西菌属 Cedecea (1981)
  • 柠檬酸杆菌属 Citrobacter (1932)
  • Cosenzaea (2011)
  • 克洛诺菌属 Cronobacter (2008)
  • Dickeya (2005)
  • Dryocola Maddock et al. 2023[2]
    • Dryocola boscaweniae Maddock et al. 2023
    • Dryocola clanedunensis Maddock et al. 2023
  • 爱德华氏菌属 Edwardsiella (1965)
  • Enterobacillus Patil et al. 2015
    • Enterobacillus tribolii Patil et al. 2015
  • 腸桿菌属 Enterobacter (1960)
  • 欧文氏菌属 Erwinia (1920)
  • 埃希氏菌属 Escherichia (1919)
  • 爱文氏菌属 Ewingella (1984)
  • Franconibacter (2014)
  • Frischella Engel et al., 2013
    • Frischella japonica
    • Frischella perrara Engel et al., 2013
  • Gibbsiella Brady et al., 2011
    • Gibbsiella acetica Geider et al. 2015
    • Gibbsiella dentisursi Saito et al. 2013
    • Gibbsiella greigii Brady et al. 2015
    • Gibbsiella papilionis Kim et al. 2013
    • Gibbsiella quercinecans Brady et al. 2011
  • 哈夫尼菌属 Hafnia (1954)
  • 华西菌属 Huaxiibacter He et al. 2022[3]
  • Izhakiella (2016)
  • 小坂菌属 Kosakonia (2013)
  • 克雷伯氏菌属 Klebsiella (1885)
  • 克吕沃尔氏菌属 Kluyvera (1981)
  • 勒克氏菌属 Leclercia (1987)
  • Lelliottia Brady et al. 2013
    • Lelliottia amnigena (Izard et al. 1981) Brady et al. 2013
    • Lelliottia aquatilis Kämpfer et al. 2018
    • Lelliottia jeotgali Yuk et al. 2018
    • Lelliottia nimipressuralis (Carter 1945) Brady et al. 2013
    • Lelliottia steviae Lin et al. 2022
  • 勒米诺氏菌属 Leminorella Hickman-Brenner et al. 1985
  • 莱文氏菌属 Levinea Young et al. 1971
  • Limnobaculum Baek et al. 2019
    • Limnobaculum allomyrinae (Lee et al. 2021) Li et al. 2023
    • Limnobaculum eriocheiris Li et al. 2023
    • Limnobaculum parvum Baek et al. 2019
    • Limnobaculum xujianqingii (Ge et al. 2021) Li et al. 2023
    • Limnobaculum zhutongyuii (Ge et al. 2021) Li et al. 2023
  • Lonsdalea Brady et al. 2012
    • Lonsdalea britannica (Brady et al. 2012) Li et al. 2017
    • Lonsdalea iberica (Brady et al. 2012) Li et al. 2017
    • Lonsdalea populi (Tóth et al. 2013) Li et al. 2017
    • Lonsdalea quercina (Hildebrand and Schroth 1967) Brady et al. 2012
  • 曼格洛杆菌属 Mangrovibacter Rameshkumar et al. 2010
    • Mangrovibacter phragmitis Behera et al. 2017
    • Mangrovibacter plantisponsor Rameshkumar et al. 2010
    • 宜兴曼格洛杆菌 Mangrovibacter yixingensis Zhang et al. 2015
  • 米勒氏菌属 Moellerella (1984)
  • 摩根氏菌属 Morganella (1943)
  • 肥杆菌属 Obesumbacterium (1963)
  • 泛菌属 Pantoea (1989)
  • 坚固杆菌属 Pectobacterium (1945)
  • Phaseolibacter Halpern et al. 2013
    • Phaseolibacter flectens (Johnson 1956) Halpern et al. 2013
  • 光杆状菌属 Photorhabdus (1993)
  • Phytobacter Zhang et al. 2017
    • Phytobacter diazotrophicus Zhang et al. 2017
    • Phytobacter massiliensis (agier et al. 2014) Ma et al. 2021* Phytobacter palmae Madhaiyan et al. 2020
    • Phytobacter ursingii' Pillonetto et al. 2018
  • 邻单胞菌属 Plesiomonas (1962)
  • Pluralibacter Brady et al. 2013
    • Pluralibacter gergoviae (Brenner et al. 1980) Brady et al. 2013
    • Pluralibacter pyrinus (Chung et al. 1993) Brady et al. 2013
  • 布拉格菌属 Pragia Aldová et al. 1988
  • 变形杆菌属 Proteus Hauser 1885
  • 普罗威登斯菌属 Providencia (1962)
  • Pseudocitrobacter Kämpfer et al., 2014
    • Pseudocitrobacter anthropi Kämpfer et al., 2014
    • Pseudocitrobacter corydidari Guzman et al. 2022[5]
    • Pseudocitrobacter faecalis Kämpfer et al., 2014
    • Pseudocitrobacter vendiensis Kämpfer et al. 2020[6]
  • 假单胞菌属 Pseudomonas (1894)
  • 拉恩氏菌属 Rahnella (1981)
  • 拉乌尔菌属 Raoultella (2001)
  • Rosenbergiella Halpern et al. 2013
    • Rosenbergiella australiborealis Lenaerts et al. 2017，也拼作：Rosenbergiella australoborealis
    • Rosenbergiella collisarenosi Lenaerts et al. 2017
    • Rosenbergiella epipactidis Lenaerts et al. 2017
      • Rosenbergiella epipactidis californiensis Álvarez-Pérez et al. 2023[7]
      • Rosenbergiella epipactidis epipactidis Álvarez-Pérez et al. 2023[7]
      • Rosenbergiella epipactidis japonicus Álvarez-Pérez et al. 2023[7]
    • Rosenbergiella gaditana Álvarez-Pérez et al. 2023[7]
    • Rosenbergiella metrosideri Álvarez-Pérez et al. 2023[7]
    • Rosenbergiella nectarea Halpern et al. 2013
      • Rosenbergiella nectarea apis Álvarez-Pérez et al. 2023[7]
      • Rosenbergiella nectarea nectarea Álvarez-Pérez et al. 2023[7]
  • Rouxiella (2015)
  • 糖杆菌属 Saccharobacter (1990)
  • 沙门氏菌属 Salmonella (1990)
  • Samsonia Sutra et al. 2001
    • Samsonia erythrinae Sutra et al. 2001
  • 沙雷氏菌属 Serratia Bizio 1823
  • 志贺氏菌属 Shigella Castellani and Chalmers, 1919
  • Shimwellia Priest and Barker 2010，本属以第一个分离出本菌种的J. L. Shimwell的名字命名
    • Shimwellia blattae (Burgess et al. 1973) Priest and Barker 2010
    • Shimwellia pseudoproteus Priest and Barker 2010
  • 干燥杆菌属 Siccibacter Stephan et al. 2014
  • Silvania Maddock et al. 2023[8]
    • Silvania confinis Maddock et al. 2023
    • Silvania hatchlandensis Maddock et al. 2023
  • Sodalis Dale and Maudlin 1999
    • Sodalis baculum Santos-Garcia et al. 2017
    • Sodalis glossinidius Dale and Maudlin 1999
    • Sodalis ligni Tláskal et al. 2023
    • Sodalis melophagi Chrudimský et al. 2012
    • Sodalis pierantonianus Oakeson et al. 2014，也拼作：Sodalis pierantonius或Sodalis pierantonii
    • Sodalis praecaptivus Chari et al. 2015
  • 塔特姆氏菌属 Tatumella (1982)
  • Thorsellia Kämpfer et al. 2006
    • Thorsellia anophelis Kämpfer et al. 2006
    • Thorsellia kandunguensis Kämpfer et al. 2015
    • Thorsellia kenyensis Kämpfer et al. 2015
  • 特拉布斯氏菌属 Trabulsiella (1992)
  • 威格尔斯沃思氏菌属 Wigglesworthia (1995)
  • 致病杆菌属 Xenorhabdus (1979)
  • 耶尔辛氏菌属 Yersinia (1944)
  • 预研菌属 Yokenella (1985)

参考文献

  1. ^ 1.0 1.1 1.2 List of genera included in families - Enterobacteriaceae. List of Prokaryotic Names with Standing in Nomenclature. [26 June 2016]. （原始内容存档于2018-10-25）. 
  2. ^ Maddock D, Brady C, Denman S, Arnold D. Description of Dryocola gen. nov. and two novel species, Dryocola boscaweniae sp. nov. and Dryocola clanedunensis sp. nov. isolated from the rhizosphere of native British oaks. Syst Appl Microbiol 2023; 46:126399.
  3. ^ 我国感染性疾病研究团队发现新的细菌菌属. 人民融媒体. [2024-05-16]. 
  4. ^ He Y, Wu S, Feng Y, Zong Z. Huaxiibacter chinensis gen. nov., sp. nov., recovered from human sputum. Int J Syst Evol Microbiol 2022; 72:5484.
  5. ^ Guzman J, Poehlein A, Glaeser SP, Schwengers O, Blom J, Hollensteiner J, Kampfer P, Vilcinskas A. Pseudocitrobacter corydidari sp. nov., isolated from the Asian emerald cockroach Corydidarum magnifica. Int J Syst Evol Microbiol 2022; 72:5497.
  6. ^ Kampfer P, Fuglsang-Damgaard D, Overballe-Petersen S, Hasman H, Hammerum AM, Fuursted K, Blom J, Glaeser SP, Hansen F. Taxonomic reassessment of the genus Pseudocitrobacter using whole genome sequencing: Pseudocitrobacter anthropi is a later heterotypic synonym of Pseudocitrobacter faecalis and description of Pseudocitrobacter vendiensis sp. nov. Int J Syst Evol Microbiol 2020; 70:1315-1320.
  7. ^ 7.0 7.1 7.2 7.3 7.4 7.5 7.6 Alvarez-Perez S, de Vega C, Vanoirbeek K, Tsuji K, Jacquemyn H, Fukami T, Michiels C, Lievens B. Phylogenomic analysis of the genus Rosenbergiella and description of Rosenbergiella gaditana sp. nov., Rosenbergiella metrosideri sp. nov., Rosenbergiella epipactidis subsp. epipactidis subsp. nov., Rosenbergiella epipactidis subsp. californiensis subsp. nov., Rosenbergiella epipactidis subsp. japonicus subsp. nov., Rosenbergiella nectarea subsp. nectarea subsp. nov. and Rosenbergiella nectarea subsp. apis subsp. nov., isolated from floral nectar and insects. Int J Syst Evol Microbiol 2023; 73:5777.
  8. ^ Maddock D, Arnold D, Denman S, Brady C. Description of a novel species of Leclercia, Leclercia tamurae sp. nov. and proposal of a novel genus Silvania gen. nov. containing two novel species Silvania hatchlandensis sp. nov. and Silvania confinis sp. nov. isolated from the rhizosphere of oak. BMC Microbiol 2022; 22:289.