Johor Darul Ta'zim than fly off to Spain on 14 April in their 'Tour of Spain' pre-season friendlies where the club will be staying at the Melia Villaitana Football Centre. On 17 April, Johor Darul Ta'zim played their first pre-season friendly match against third tier Primera Federación club, Real Murcia at the Estadio Nueva Condomina in which Johor Darul Ta'zim won 3–0 with Arif Aiman, two new signings Jalil Elías and Francisco Geraldes scoring in the match. On the next day, Johor Darul Ta'zim played against fourth tier Segunda Federación club, La Nucía at the Estadi Olímpic Camilo Canoin which the players that played the day before was rested. Johor Darul Ta'zim conceded the first goal to the opponent before Óscar Arribas and Nicolao Dumitru sealed the 3–1 win for the club. On 23 April, They face fifth tier Tercera Federación side, Castellonense however, the match got cancelled and instead they face amateur club, Club Costa City which is owned by Atletico Madrid star player, Saúl Ñíguez where they hammered 7–0 with Ramadhan Saifuillah scoring a hat-trick in the match. On 24 April, Johor Darul Ta'zim played their fourth pre-season match against third tier Primera Federación club Alcoyano in which they won 2–1. The next day, Johor Darul Ta'zim suffered to their first pre-season 2–0 defeat to second tier Segunda División club Eldense. The club then played their final pre-season friendly on 29 April against Benidorm winning them 2–1.
On 10 May 2024, Johor Darul Ta'zim will faced rival Selangor in the 2024 Piala Sumbangsih but was awarded the 3–0 win regarding the controversies arousing Selangor player Faisal Halim. On 22 June, Heberty become the first player in the season to score a hat-trick for the club in a 3–0 win over Penang. On 24 August, JDT thrash Selangor 6–1 in the 2024 Malaysia FA Cup final where Juan Muñiz scored a hat-trick in the match to win the cup. During the match against Kelantan Darul Naim on 22 September, World famous youtuber, IShowSpeed make a visit to the Sultan Ibrahim Stadium in which Bergson scored a hat-trick during the game in a 6–1 win.
^Match was deemed as cancelled by FAM after Selangor FC withdrew due to safety concerns following a series of attacks on players. As a result, JDT is awarded a 3-0 win
^Location changed due to Sultan Ibrahim Stadium following FAM decision to classify the match to be of a safety risk for a high-profile match. However, Perak FC will still be the designated "Home Team" for this match.
^Location changed due to Sultan Muhammad IV Stadium under-going renovation. However, Kelantan Darul Naim FC will still be the designated "Home Team" for this match.
Updated to match(es) played on 18 December 2024. Source: MFL Rules for classification: 1) Points; 2) Goal difference; 3) Number of goals scored. Notes:
^Since the winners of the 2024 Malaysia FA Cup (Johor Darul Ta'zim) qualified for AFC competition based on their league positions, the berths awarded to the 2nd-placed team in the league.
Updated to match(es) played on 4 December 2024. Source: Asian Football Confederation Rules for classification: 1) points; 2) goal difference; 3) number of goals scored; 4) number of matches won; 5) penalty shoot-out if only two teams remain tied and played each other on the final matchday 6) fair play ranking; 7) drawing of lots
^Malaysian University applied to change the venue due to the unsuitability of their stadium, UKM Bangi Stadium, Bangi, to host the match. Their application to play at Sultan Ibrahim Stadium on the first leg, was approved by Johor Darul Ta'zim.[44]
^Match to be played at Yongin Mireu Stadium, Yongin, instead of their regular home stadium, Gwangju Football Stadium due to severe pitch issues.
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